Metadata and website for the Open Bio Ontologies Foundry Ontology Registry
📮 An integrative registry of biological databases, ontologies, and nomenclatures.
LLM-driven curation assist tool
Evidence validation and policy engine for AI-assisted biological curation
🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from primary sources.
📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology
CIViC is an open access, open source, community-driven web resource for Clinical Interpretation of Variants in Cancer
Text mining for pharmacogenomic associations for PharmGKB
🗳️ Prediction and curation of semantic mappings in SSSOM
Next-generation Biocuration App for annotating cases and PhenoPackets
🐳 Apollo 2.X Docker Image
🗄️ Conversion of biomedical nomenclatures like HGNC to OBO
The Curation of Neurodegeneration Supporting Ontology (CONSO)
A package for generating curation sheets for rationally enriching a BEL graph using INDRA and PyBEL
Guidelines and procedures for curation (manual and semi-automated)
Curation of Neurodegeneration in Biological Expression Language (CONIB)
Code, notebooks, and resources for exploring and analyzing mechanistic knowledge graphs about 'rona
My personal website, served at https://cthoyt.com
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