Issues

• datalab intro to remote computing

  dib-lab/farm-notes#76 · Filter by author bluegenes opened on Jul 10, 2025

• 2025 "getting started on farm" doc

  dib-lab/farm-notes#75 · Filter by author bluegenes opened on Jul 10, 2025

• Managing home directories and project space on farm's disks

  dib-lab/farm-notes#72 · Filter by author ctb opened on Sep 18, 2024
  1

• Farm status webpage link and subscription for updates

  dib-lab/farm-notes#71 · Filter by author ccbaumler opened on Sep 12, 2024

• putting conda environments outside your home directory

  dib-lab/farm-notes#70 · Filter by author ctb opened on Sep 12, 2024
  3

• attaching to a node running a job in order to inspect processes, e.g. top

  dib-lab/farm-notes#68 · Filter by author ctb opened on Apr 15, 2024

• See your farm account associations

  dib-lab/farm-notes#67 · Filter by author ccbaumler opened on Sep 7, 2023

• additional guide and steps to make installing conda more accessible for beginner

  dib-lab/farm-notes#66 · Filter by author yuenchingshen opened on Sep 6, 2023
  2

• useful disk usage commands

  dib-lab/farm-notes#65 · Filter by author ctb opened on Sep 1, 2023
  4

• how to debug ssh login issues on farm

  dib-lab/farm-notes#62 · Filter by author ctb opened on Jun 25, 2023

• Using Singularity and Nextflow in the Farm

  dib-lab/farm-notes#59 · Filter by author ccbaumler opened on Apr 5, 2023
  1

• A basic intro to HPC and the Farm Cluster

  dib-lab/farm-notes#58 · Filter by author ccbaumler opened on Mar 23, 2023

• Make your terminal colorful

  dib-lab/farm-notes#57 · Filter by author hehouts opened on Mar 17, 2023

• remote ssh access to on-campus desktop computers

  dib-lab/farm-notes#56 · Filter by author ctb opened on Mar 12, 2023

• Binder quick-start

  dib-lab/farm-notes#55 · Filter by author hehouts opened on Mar 11, 2023
  1

• how farm queue priorities work

  dib-lab/farm-notes#54 · Filter by author ctb opened on Mar 1, 2023

• use seqtk to extract subsequences from FASTA files

  dib-lab/farm-notes#53 · Filter by author ctb opened on Feb 4, 2023

• running jupyter notebooks on farm

  dib-lab/farm-notes#51 · Filter by author ctb opened on Oct 19, 2022
  5

• automating and running things in parallel on farm

  dib-lab/farm-notes#50 · Filter by author ctb opened on Oct 15, 2022

• hosting mkdocs sites on farm

  dib-lab/farm-notes#49 · Filter by author ctb opened on Oct 14, 2022

• setting up authentication for static files on farm

  dib-lab/farm-notes#48 · Filter by author ctb opened on Oct 14, 2022

• Ross-Ibarra lab docs

  dib-lab/farm-notes#47 · Filter by author ctb opened on Sep 25, 2022

• installing python projects from git/github using pip

  dib-lab/farm-notes#46 · Filter by author ctb opened on Sep 21, 2022
  2

• some snakemake principles -

  dib-lab/farm-notes#45 · Filter by author ctb opened on Sep 12, 2022
  3

• running RStudio Server on farm using R as installed in a conda environment

  dib-lab/farm-notes#44 · Filter by author ctb opened on Sep 11, 2022
  15